BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008F10SP1|AL425906
(822 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1356 1578 0.0
>3x_Contig1356
Length = 8043
Score = 1578 bits (795), Expect = 0.0
Identities = 816/823 (99%), Gaps = 1/823 (0%)
Strand = Plus / Minus
Query: 1 atccaaaggccaagggaattcgattccaattgcggatttggtaaggctgctttggctgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3624 atccaaaggccaagggaattcgattccaattgcggatttggtaaggctgctttggctgct 3565
Query: 61 tcgttttgggtctcgaatgacaaacgaatttttcccactgagttctctcatttctttcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3564 tcgttttgggtctcgaatgacaaacgaatttttcccactgagttctctcatttctttcct 3505
Query: 121 gcatttgagctcgcatctgcaagaactggaacttctggaggcacagttgatttataatgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3504 gcatttgagctcgcatctgcaagaactggaacttctggaggcacagttgatttataatgc 3445
Query: 181 tcgagggttcttcttactcatttgatatatatwagaaaactttttttttattaaacgtta 240
|||||||||||||||||||||||||||||||| ||||||||| || | |||||||||||
Sbjct: 3444 tcgagggttcttcttactcatttgatatatataagaaaacttaattctaattaaacgtta 3385
Query: 241 cctattaattatactgattctgtctatttaaaccctttcttagttttaatcatagctaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3384 cctattaattatactgattctgtctatttaaaccctttcttagttttaatcatagctaat 3325
Query: 301 catcgcaggtagaattttagttgtatctggttctaagttccacaagaaagtgaaaataag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3324 catcgcaggtagaattttagttgtatctggttctaagttccacaagaaagtgaaaataag 3265
Query: 361 atatatttgavatgggtttgttaccaactgataagtttgctacaaaggctattcacgccg 420
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3264 atatatttgaaatgggtttgttaccaactgataagtttgctacaaaggctattcacgccg 3205
Query: 421 gtactcacgtggatgttcacggttctgtcattgaaccaatttctttgtctactactttca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3204 gtactcacgtggatgttcacggttctgtcattgaaccaatttctttgtctactactttca 3145
Query: 481 agcagtctgctccagctcaaccaattggtgaatacgaatactctagatctcaaaatccaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3144 agcagtctgctccagctcaaccaattggtgaatacgaatactctagatctcaaaatccaa 3085
Query: 541 atagaaagaatttggaagatgccattgctgctttggaaaatggtaaatacggtttagcgt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3084 atagaaagaatttggaagatgccattgctgctttggaaaatggtaaatacggtttagcgt 3025
Query: 601 tctctagtggttccgccaccactgctgtgattctacaatccttgccacaaggttctcatg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3024 tctctagtggttccgccaccactgctgtgattctacaatccttgccacaaggttctcatg 2965
Query: 661 cagtttctattggtgatgtttacggtggtactcacagatacttcaccaaagttgccaatg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2964 cagtttctattggtgatgtttacggtggtactcacagatacttcaccaaagttgccaatg 2905
Query: 721 ctcatggtgttgaaaccactttcaccaacaacttggtagctgagttgccatctttgatca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2904 ctcatggtgttgaaaccactttcaccaacaacttggtagctgagttgccatctttgatca 2845
Query: 781 aggaaaacactaaattggtttggattgaaa-cccaactaaccc 822
|||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 2844 aggaaaacactaaattggtttggattgaaaccccaactaaccc 2802
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7280
Number of Sequences: 1807
Number of extensions: 7280
Number of successful extensions: 56
Number of sequences better than 1.0e-20: 1
length of query: 822
length of database: 10,358,551
effective HSP length: 16
effective length of query: 806
effective length of database: 10,329,639
effective search space: 8325689034
effective search space used: 8325689034
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)